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\begin{document}
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%title page
\input{0.0.title.tex}
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%Dedication
%I would like to dedicate this thesis to my loving family ...
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\input{0.1.declaration.tex}
\input{0.2.ack.tex}
\input{0.3.abstract.tex}
\input{0.4.pub.tex}
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\addcontentsline{toc}{chapter}{List of Figures}
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\input{1.intro.tex}
\input{2.back.tex}
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\input{5.sic.tex}
\input{6.conclusion.tex}
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\addcontentsline{toc}{chapter}{References}
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%\appendix
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%\addcontentsline{toc}{chapter}{Appendices}
%\chapter{Amino Acids\label{appAmino}}
%\begin{figure}[h]
%\begin{center}
%\includegraphics[width=1\textwidth]{./images/background/aminoacids}
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%\caption{Twenty different amino acids, their structures and chemical properties.\index{Amino Acid!chemical properties}\cite{Lehninger2012}.}
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%\addcontentsline{toc}{chapter}{Index}
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